Implications of plants genetic transformation assessed by geneticist, biochemist and physiologist

Implications of plants genetic transformation assessed by geneticist, biochemist and physiologist

Автор: Enikeev A.G., Kopytina T.V., Maximova L.A., Nurminskaya J.V., Shvetsov S.G.

Журнал: Журнал стресс-физиологии и биохимии @jspb

Статья в выпуске: 4 т.11, 2015 года.

Бесплатный доступ

Transgenic plants creation methodology developed for several decades has gained significant advances. However, problems of unanticipated effects of transgenosis, stability of GMO characteristics and establishing criteria of their safety evaluation remain unresolved. The analysis of different approaches to assessing the impact of plant genetic transformation is presented. It is concluded that the profound studies on the physiology of plant-agrobacterial symbiosis as a methodological basis of plants genetic engineering can answer many unresolved issues of genetic engineering.

Transgenosis, assessment of implications, different approaches

Короткий адрес: https://sciup.org/14323934

IDR: 14323934

Список литературы Implications of plants genetic transformation assessed by geneticist, biochemist and physiologist

  • Alonso J.M., Stepanova, A.N., Leisse, T.J., Kim, C.J., Chen H., Shinn P., Stevenson D.K., Zimmerman J., Barajas P., Cheuk R., Gadrinab C., Heller C., Jeske A., Koesema E., Meyers C.C., Parker H., Prednis L., Ansari Y., Choy N., Deen H., Geralt M., Hazari N., Hom E., Karnes M., Mulholland C., Ndubaku R., Schmidt I., Guzman P., Aguilar-Henonin L., Schmid M., Weigel D., Carter D.E., Marchand T., Risseeuw E., Brogden D., Zeko A., Crosby W.L., Berry C.C., Ecker, J.R. (2003) Genome-wide insertional mutagenesis of Arabidopsis thaliana. Science. 301(5633). 653-657
  • Antia R., Levin B.R., May R.M. (1994) Within-Host Population Dynamics and the Evolution and Maintenance of Microparasite Virulence. The American Naturalist. 144(3). 457-472
  • Bartlett J. G., Smedley M. A., Harwood W. A. (2014) Analysis of T-DNA/Host-Plant DNA Junction Sequences in Single-Copy Transgenic Barley Lines. Biology. 3(1). 39-55
  • Baudo M.M., Lyons R., Powers S., Pastori G.M., Edwards K.J., Holdsworth M.J., Stewry P.R. (2006) Transgenesis has less impact on the transcriptome of wheat grain than conventional breeding. Pant Biotechnology Journal. 4(4). 369-380
  • Bourque J.E. (1995) Antisense strategies for genetic manipulations in plants. Plant Science. 105(2). 125-149
  • Brichkova G.G., Shishova A.M., Maneshina T.V., Kartel’ N.A. (2007) Tolerance to aluminum in genetically modified tobacco plants. Cytology and Genetics. 41(3). 151-155
  • Chang Y., Zhao C., Zhu Z., Wu Z., Zhou J., Zhao Y., Lu X., Xu G. (2012) Metabolic profiling based on LC/MS to evaluate unintended effects of transgenic rice with cry1Ac and sck genes. Plant Molecular Biology. 78(4-5). 477-487
  • Cayford J. (2003) GMO opposition not based on a mistake. Nature Biotechnology. 21(5). 493
  • Cellini F., Chesson A., Colquhoun I., Constable A., Davies H.V., Engel K.H., Gatehouse A.M.R., Kärenlampi S., Kok E.J., Leguay J.-J., Lehesranta S., Noteborn H.P.J.M., Pedersen J., Smith M. (2004) Unintended effects and their detection in genetically modified crops. Food and Chemical Toxicology. 42(7). 1089-1125
  • Choi J., Jeon J., Lee Y. H. (2015) Identification of T-DNA integration sites: TAIL-PCR and sequence analysis. Genetic Transformation Systems in Fungi, Vol. 2. Springer International Publishing. 217-222
  • Day C.D., Lee E., Kobayash J., Holappa L.D., Albert H., Ow D.W. (2000) Transgene integration into the same chromosome location can produce alleles that express at a predictable level, or alleles that are differentially silenced. Genes Dev. 14(22). 2869-2880
  • Defernez M., Colquhoun I.J. (2004) NMR approaches to detect unintended effects of genetic modification in plants. Genomics for biosafety in plant biotechnology (Eds J.P.H. Nap, A. Atanassov, W.J. Stiekema) -NATO science series, IOS press. 47-57
  • Dietz-Pfeilstetter A. (2010) Stability of transgene expression as a challenge for genetic engineering. Plant Science. 179(3). 164-167
  • Enikeev A.G., Kopytina T.V., Semenova L.A., Shafikova T.N., Gamanets L.V., Volkova O.D., Shvetsov S.G, Rusaleva T.M. (2010) Tobacco cell cultures transformed by the hsp 101 gene exhibit an increased resistance to potassium fluoride. Doklady Biological Sciences. 430(1). 29-30
  • Enikeev A.G., Kopytina T.V., Maximova L.A., Nurminskaya Yu.V., Shafikova T.N., Rusaleva T.M., Fedoseeva I.V., Shvetsov S.G. (2015) Physiological consequences of genetic transformation: result of target gene expression or stress reaction? Journal of Stress Physiology and Biochemistry. 11(2). 64-72
  • Espinoza C., Schlechter R., Herrera D., Torres E., Serrano A., Medina C., Arce-Johnson P. (2013) Cisgenesis and intragenesis: new tools for improving crops. Biological Research. 46(4). 323-331
  • Feldmann K., Marks M., Christianson M., Quatrano R. (1989) A dwarf mutant of Arabidopsis generated by T-DNA insertion mutagenesis. Science. 243(4896). 1351-1354
  • Filipenko E.A., Deineko E.V., Shumnyi V.K. (2009) Specific features of T-DNA insertion regions in transgenic plants. Russian Journal of Genetics. 45(11). 1289-1301
  • Finn T.E., Wang L., David Smolilo D., Smith N.A., White R., Chaudhury A., Dennis E.S., Wang M.B. (2011) Transgene expression and transgene-induced silencing in diploid and autotetraploid Arabidopsis. Genetics. 187(2). 409-423
  • Flores S., Saxena D., Stotzky G. (2005) Transgenic Bt plants decompose less in soil than non-Bt plants. Soil Biology and Biochemistry. 37(6). 1073-1082
  • Fonseca C., Planchon S., Serra T., Chander S., Saibo N.J., Renaut J., Oliveira M.M., Batista R. (2015) In vitro culture may be the major contributing factor for transgenic versus nontransgenic proteomic plant differences. Proteomics. 15(1). 124-134
  • Genetic Engineering: Principles and Methods (2007) Ed. Setlow J.K. Springer. New York. 190 p
  • Gelvin S.B. (2000) Agrobacterium and plant genes involved in T-DNA transfer and integration. Annual Review of Plant Biology. 51(1). 223-256
  • Gohlke J., Deeken R. (2014) Plant responses to Agrobacterium tumefaciens and crown gall development. Frontiers in Plant Science. 5. 155 DOI: 10/3389/fpls.2014.00155
  • Holdrege C. (2008) Understanding the unintended effects of genetic manipulation. An introduction. Unintended Effects of Genetic Manipulation -A Project of The Nature Institute. doi: http://natureinstitute.org/txt/ch/nontarget.php
  • Holme I.B., Wendt T., Holm P.B. (2013) Intragenesis and cisgenesis as alternatives to transgenic crop development. Plant Biotechnology Journal. 11(4). 395-407
  • Hou H., Atlihan N., Lu Z. X. (2014) New biotechnology enhances the application of cisgenesis in plant breeding. Frontiers in Plant Science. 5. 389 DOI: 10.3389/fpls.2014.00389
  • Jacobsen E., Schouten H. J. (2014) Cisgenesis: an important sub-invention for traditional plant breeding companies. Euphytica. 170(1-2). 235-247
  • Johnson J.M., Oelmüller R. (2009) Mutualism or parasitism: life in an unstable continuum. What can we learn from the mutualistic interaction between Piriformospora indica and Arabidopsis thaliana. Endocyt Cell Research. 19. 81-110
  • Joyce P., Hermann S., O'Connell A., Dinh Q., Shumbe L., Lakshmanan, P. (2014) Field performance of transgenic sugarcane produced using Agrobacterium and biolistics methods. Plant Biotechnology Journal. 12(4). 411-424
  • Kawakatsu T., Kawahara Y., Itoh T., Takaiwa F. (2013) A whole-genome analysis of a transgenic rice seed-based edible vaccine against cedar pollen allergy. DNA Research. 20(6). 623-631
  • Kim H.K., Choi Y.H., Verpoorte R. (2011) NMR-based plant metabolomics: where do we stand, where do we go? Trends in Biotechnology. 29(6). 267-275
  • Kim J.K., Park S.Y., Lee S.M., Lim S.H., Kim H.J., Oh S.D., Yeo Y., Cho H.S., Ha S.H. (2013) Unintended polar metabolite profiling of carotenoid-biofortified transgenic rice reveals substantial equivalence to its non-transgenic counterpart. Plant Biotechnology Reports. 7(1). 121-128
  • Kier E.T., van der Heijden M.G.A. (2006) Mutualistic stability in the arbuscular mycorrhizal symbiosis: exploring hypotheses of evolutionary cooperation. Ecology. 87(7). 1627-1636
  • Kohli A., Gahakwa D., Vain P., Laurie D.A., Christou P. (1999) Transgene expression in rice engineered through particle bombardment: molecular factors controlling stable expression and transgene silencing. Planta. 208(1). 88-97
  • Kolchanov N.A., Ignatieva E.V., Podkolodnaya O.A., Likhoshvai V.A., Matushkin Yu.G. (2013) Gene networks. Russian Journal of Genetics: Applied Research. 17(4/2). 833-850 (In Russ)
  • Kolodyazhnaya Ya.S., Kochetov A.V., Shumnyi V.K. (2006) Transgenesis as a Mode of Increasing Plant Resistance to Elevated Heavy Metal Concentrations. Advances in Current Biology. 126(5). 456-462. (In Russ)
  • Krysan P.J., Young J.C., Sussman M.R. (1999) T-DNA as an insertional mutagen in Arabidopsis. The Plant Cell Online. 11(12). 2283-2290
  • Krysan P.J., Young J.C., Jester P.J., Monson S., Copenhaver G., Preuss D., Sussman M.R. (2002) Characterization of T-DNA insertion sites in Arabidopsis thaliana and the implications for saturation mutagenesis. Omics: a Journal of Integrative Biology. 6(2). 63-174
  • Li X., Huang K.L., Zhu B.Z., Tang M.Z., Luo Y.B. (2005) Potentiality of “omics” techniques for the detection of unintended effects in genetically modified crops. Journal of Agricultural Biotechnology. 13. 1082-1088
  • Magaña-Gómez J.A., Calderón de la Barca A.M. (2009) Risk assessment of genetically crops for nutrition and health. Nutrition Reviews. 67(1). 1-16
  • Magori S., Citovsky V. (2011) Epigenetic control of Agrobacterium T-DNA integration. Biochimica et Biophysica Acta (BBA)-Gene Regulatory Mechanisms. 1809(8). 388-394
  • Mano Y., Nemoto K. (2012) The pathway of auxin biosynthesis in plants. Journal of Experimental Botany. 63(8). 2853-2872
  • Marenkova-Novoselia T. V., Deineko E. V., Shumnyi V. K. (2007) Mosaic expression pattern of the nptII gene in transgenic tobacco plants Nu 21. Russian Journal of Genetics. 43(7). 780-790
  • Matzke A.J., Matzke M.A. (1998) Position effects and epigenetic silencing of plant transgenes. Current Opinion in Plant Biology. 1(2). 142-148
  • Meyer H. (2011) Systemic risks of genetically modified crops: the need for new approaches to risk assessment. Environmental Sciences Europe. 23(7). 1-11
  • Nielsen K.M. (2003) Transgenic organisms: time for conceptual diversification? Nature Biotechnology. 21(3). 227-228
  • Paepe A., Buck S., Nolf J., Lerberge E., Depicker, A. (2013) Site-specific T-DNA integration in Arabidopsis thaliana mediated by the combined action of CRE recombinase and C31 integrase. The Plant Journal. 75(1). 172-184
  • Permyakova N.V., Shumnyi V.K., Deineko E.V. (2009) Agrobacterium-mediated transformation of plants: Transfer of vector DNA fragments in the plant genome. Russian Journal of Genetics. 45(3). 266-275
  • Plischke A., Choi Y.H., Brakefield P.M., Klinkhamer P.G., Bruinsma M. (2012) Metabolomic plasticity in GM and non-GM potato leaves in response to aphid herbivory and virus infection. Journal of Agricultural and Food Chemistry. 60(6). 1488-1493
  • Provorov N. A., Tikhonovich I. A. (2014a) Genetic and molecular basis of symbiotic adaptations. Biology Bulletin Reviews. 4(6). 443-456
  • Provorov N. A., Tikhonovich I. A. (2014b) Super-species genetic systems. Journal of General Biology. 75(4). 247-260
  • Reddy M.S.S., Dinkins R.D., Collins G.B. (2003) Gene silencing in transgenic soybean plants transformed via particle bombardment. Plant Cell Reports. 21(7). 676-683
  • Redman R.S., Dunigan D.D., Rodriguez R.J. (2001) Fungal symbiosis from mutualism to para-sitism: who controls the outcome, host or invader? New Phytologist. 151(3). 705-716
  • Reshetnikov V.N., Spiridovich E.V., Nosov A.M. (2014) Plant biotechnology and perspectives of its development. Plant Physiology and Genetics. 46(1). 3-18. (In Russ)
  • Rischer H., Oksman-Caldentey K.-M. (2006) Unintended effects in genetically modified crops: revealed by metabolomics? Trends in Biotechnology. 2(3). 102-104
  • Roitman V.A., Be’er S.A.(2008) Parasitism as a form symbiotic relations. Moskow: KMK Scientific Press Ltd. 310 p
  • Rommens C.M., Haring M.A., Swords K., Davies H.V., Belknap W.R. (2007) The intragenic approach as a new extension to traditional plant breeding. Trends in Plant Science. 12(9). 397-403
  • Russell A.W., Sparrow R. (2008) The case for regulating intragenic GMOs. Journal of Agricultural and Environmental Ethics. 21(2). 153-181
  • Saxena D., Stotzky G. (2001) Bt corn has a higher lignin content than non-Bt corn. American Journal of Botany. 88(9). 1704-1706
  • Shchelkunov S.N., Konstantinov Yu.M., Deineko E.V. (2011) Transplastome plants. Russian Journal of Genetics: Applied Research. 15(4). 808-817. (In Russ)
  • Simó C., Ibáez C., Valdés A., Cifuentes A., García-Cañas V. (2014) Metabolomics of Genetically Modified Crops. International Journal of Molecular Sciences. 15(10). 18941-18966
  • Smith S.E., Read D.J. (2008) Mycorrhizal Symbiosis. Third edition. London. Academic Press. 2008. 787 p
  • Sorochinskii B.V., Burlaka O.M., Naumenko V.D., Sekan A.S. (2011) Unintended effects of genetic modifications and methods of their analysis in plants. Cytology and Genetics. 45(5). 324-332
  • Tang W., Newton R.J., Weidner D.A. (2007) Genetic transformation and gene silencing mediated by multiple copies of a transgene in eastern white pine. Journal of Experimental Botany. 58(3). 545-554
  • Thrall P.H., Hochberg M.E., Burdon J.J., Bever J.D. (2006) Coevolution of symbiotic mutualists and parasites in a community context. Trends in Ecology and Evolution. 22(3). 120-126
  • Tinland B. (1996) The integration of T-DNA into plant genomes. Trends Plant Science. 1(6). 178-184
  • Transgenic plants: methods and protocols (2005) ed. by Pena L. (Methods in molecular biology, v. 286). Totowa, New Jersey. Humana Press. 437 p
  • Xu W., Guo F., Zhou X., Shang Y., Yuan Y., Zhang F., Huang, K. (2013) Unintended effects were investigated in antioxidant activity between genetically modified organisms and their nontransgenic control. African Journal of Biotechnology. 10(46). 9272-9279
  • Yamasaki S., Oda, M., Daimon H., Mitsukuri K., Johkan M., Nakatsuka T., Mishiba K.I. (2011) Epigenetic modifications of the 35S promoter in cultured gentian cells. Plant Science. 180(4). 612-619
  • Zhao X., Ting T.A.N.G., Liu F. X., Lu C. L., Hu, X. L., Ji L. L., Liu Q.Q. (2013) Unintended Changes in Genetically Modified Rice Expressing the Lysine-Rich Fusion Protein Gene Revealed by a Proteomics Approach. Journal of Integrative Agriculture. 12(11). 2013-2021
  • Zhou J., Zhang L., Li X., Chang Y., Gu Q., Lu X., Zhu Z., Xu G.(2012) Metabolic profiling of transgenic rice progeny using gas chromatography-mass spectrometry: the effects of gene insertion, tissue culture and breeding. Metabolomics. 8(4). 529-539
  • Zolla L., Rinalducci S., Antonioli P., Righetti P.G. (2008) Proteomics as a complementary tool for identifying unintended side effects occurring in transgenic maize seeds as a result of genetic modifications. Journal of Proteome Research. 7(5). 1850-1861
  • Zuchenko A.A. (2003) Role of genetic engeneering in adaptive system of plant breeding (myths and reality). Sel'skokhozyaistvennaya Biologiya. 1. 3-33. (In Russ)
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